Past Member

Pratik Shah

Former Principal Research Scientist
Publication

A deep-learning toolkit for visualization and interpretation of segmented medical images

A deep-learning toolkit for visualization and interpretation of segmented medical images, Cell Reports Methods, Volume 1, Issue 7, 2021. 100107, ISSN 2667-2375, https://doi.org/10.1016/j.crmeth.2021.100107.

Publication

Automated end-to-end deep learning framework for classification and tumor localization from native nonstained pathology images

Akram Bayat, Connor Anderson and Pratik Shah. "Automated end-to-end deep learning framework for classification and tumor localization from native nonstained pathology images," Proc. SPIE 11596, Medical Imaging 2021: Image Processing, 115960A (15 February 2021); doi: 10.1117/12.2582303

Publication

Use of Deep Learning to Develop and Analyze Computational Hematoxylin and Eosin Staining of Prostate Core Biopsy Images for Tumor Diagnosis

Rana A, Lowe A, Lithgow M, et al. Use of Deep Learning to Develop and Analyze Computational Hematoxylin and Eosin Staining of Prostate Core Biopsy Images for Tumor Diagnosis. JAMA Netw Open. 2020;3(5):e205111. doi:10.1001/jamanetworkopen.2020.5111

Publication

Artificial Intelligence for Clinical Trial Design

Harrer S, Shah P, Antony B, Hu J. Artificial Intelligence for Clinical Trial Design. Trends Pharmacol Sci. 2019 Aug;40(8):577-591. doi: 10.1016/j.tips.2019.05.005. PMID: 31326235.

Publication

Automated process incorporating machine learning segmentation and correlation of oral diseases with systemic health

Gregory Yauney, Rana A, Javia P, Wong L, Muftu A, Shah P. 41st IEEE International Engineering in Medicine and Biology Conference (2019). DOI: 10.1109/EMBC.2019.8857965

Publication

Digital reconstruction of teeth using near-infrared light

Keith Angelino, Yauney G, Rana A, Muftu A, Edlund D, Shah P. 41st IEEE International Engineering in Medicine and Biology Conference (2019). DOI: 10.1109/EMBC.2019.8857734

Publication

Artificial intelligence and machine learning in clinical development: a translational perspective

Pratik Shah, Francis Kendall, Sean Khozin, Ryan Goosen, Jianying Hu, Jason Laramie, Michael Ringel & Nicholas Schork Nature Digital Medicine volume 2, Article number: 69 (2019). DOI: 10.1038/s41746-019-0148-3

Publication

Improving cancer diagnosis and care: clinical application of computational methods in precision oncology

Pratik Shah. Proceedings of a Workshop, National Academies of Sciences, Engineering, and Medicine. Washington, DC: The National Academies Press (2019). PMID: 31386317

Publication

Wearable Lab on Body: Combining Sensing of Biochemical and Digital Markers in a Wearable Device

P. Pataranutaporn, A. Jain, C. M. Johnson, P. Shah and P. Maes, "Wearable Lab on Body: Combining Sensing of Biochemical and Digital Markers in a Wearable Device," 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), Berlin, Germany, 2019, pp. 3327-3332. doi: 10.1109/EMBC.2019.8857479

Publication

Computational histological staining and destaining of prostate core biopsy RGB images with generative adversarial neural networks

Aman Rana, Yauney G, Lowe A, Shah P. IEEE Xplore, Proceedings of 17th International Conference on Machine Learning and Applications (2018) (Conference acceptance rate: 14%). DOI: 10.1109/ICMLA.2018.00133

Publication

Machine learning algorithms for classification of microcirculation images from septic and non-septic patients

Perikumar Javia, Rana A, Shapiro NI, Shah P. IEEE Xplore, Proceedings of 17th International Conference on Machine Learning and Applications (2018) (Conference acceptance rate: 14%). DOI: 10.1109/ICMLA.2018.00097

Publication

Reinforcement learning with action-derived rewards for chemotherapy and clinical trial dosing regimen selection

Gregory Yauney, Shah P. Proceedings of the 3rd Machine Learning for Healthcare Conference (2018). PMLR 85:161-226

Publication

Technology-enabled examinations evaluated jointly with routine health screenings: an observational study at the 2015 Kumbh Mela in India

P. Shah*, G. Yauney*, O. Gupta, V. Patalano II, M. Mohit, R. Merchant, SV Subramanian. BMJ Open (2018). 8:e018774. PMID: 29678964 * Equal contribution

Publication

Clinical validation and assessment of a modular fluorescent imaging system and algorithm for detection and quantification of dental plaque

K. Angelino*, P. Shah*, D. Edlund, M. Mohit, G. Yauney. BMC Oral Health 17.1: 162 (2017). PMID: 29284461. * Equal contribution

Publication

Automated segmentation of gingival diseases from oral images

A. Rana, G. Yauney, L. C. Wong, O. Gupta, A. Muftu, P. Shah. IEEE Healthcare Innovations and Point of Care Technologies (HI-POCT). IEEE (2017). DOI: 10.1109/HIC.2017.8227605

Publication

Detection of biomarkers of periodontal disease in human saliva using stabilized, vertical flow immunoassays

E. Yee, S. Lathwal, P. Shah, H. Sikes. ACS sensors 2.11 (2017): 1589-1593. PMID: 29090909

Publication

Near-infrared transillumination guides administration of dental 2D radiography and CBCT imaging

K. Angelino, D. A. Edlund, G. Bhatia, S. Wu, P. Shah. IEEE 17th International Conference on Bioinformatics and Bioengineering (2017). DOI: 10.1109/BIBE.2017.00-33

Publication

Convolutional neural network for combined classification of fluorescent biomarkers and expert annotations using white light images

G. Yauney, K. Angelino, D. A. Edlund, P. Shah. IEEE 17th International Conference on Bioinformatics and Bioengineering (2017). DOI: 10.1109/BIBE.2017.00-37

Publication

Near-infrared imaging for detecting caries and structural deformities in teeth

K. Angelino, D. A. Edlund, P. Shah. Near-Infrared Imaging for Detecting Caries and Structural Deformities in Teeth. Journal of Translational Engineering in Health and Medicine (2017). PMID: 28507826

Publication

Design and preliminary evaluation of a wearable device for mass-screening of sleep apnea

R. S. Puri, A. G. Athanassiadis, N. Gill, S. S. Sathya, G. Rathod, A. Wahi, G. Satat, M. Majmudar, P. Shah. IEEE 38th Annual International Conference of the Engineering in Medicine and Biology Society (EMBC). pp. 1870-1873. IEEE, (2016). PMID: 28268691

Publication

Prior publications of Dr. Pratik Shah